A proposal for encouraging user contributed annotations to Uniprot

Today I attended a presentation by Maria J Martin about Uniprot and various other EBI database services. At the end of the talk, someone asked something to the effect of “How about simplifying user submission of annotations / corrections” – they wanted something in addition to the current ‘free text’ feedback and comments forms, and wanted a way to easily suggest annotations in a structured way. There was some suggestion of wiki’s etc, and how this had been tried to some extent, but they hadn’t got it right yet.

Here is my take on an approach to user submitted content to Uniprot. Essentially users should be able to add/change annotations piecewise, directly via the standard Uniprot web page for each protein record. These changes would ‘go live’ immediately, but since a large part of the value in Uniprot lies in its curation by expert annotators, the interface would also provide a very clear separation between user-submitted ‘uncurated’ annotations and the current expertly curated annotations.

I’ve made some mockups of how some parts of the UI may look in my little fantasy world:

Uniprot mockup 1, User/annotations and History Continue reading